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Publications archive

Publié le 12 avril 2017

  
Thermostable Transketolase from Geobacillus stearothermophilus: Characterization and Catalytic Properties
Abdoul-Zabar J, Sorel I, Helaine V, Charmantray F, Devamani T, Yi D, de Berardinis V, Louis D, Marliere P, Fessner WD, Hecquet L
Glancing at host adaptation in Ralstonia solanacearum through comparative genomics of highly host-adapted lineages
Ailloud F, Cellier G, Roche D, Allen C, Prior P
Phytopathology 103 (6), 3-3, 2013
Life in an Arsenic-Containing Gold Mine: Genome and Physiology of the Autotrophic Arsenite-Oxidizing Bacterium Rhizobium sp NT-26
Andres J, Arsene-Ploetze F, Barbe V, Brochier-Armanet C, Cleiss-Arnold J, Coppee JY, Dillies MA, Geist L, Joublin A, Koechler S, Lassalle F, Marchal M, Medigue C, Muller D, Nesme X, Plewniak F, Proux C, Ramirez-Bahena MH, Schenowitz C, Sismeiro O, Vallenet D, Santini JM, Bertin PN
DNA barcoding in a biodiversity hot spot: potential value for the identification of Malagasy Euphorbia L. listed in CITES Appendices I and II
Aubriot X, Lowry PP, Cruaud C, Couloux A, Haevermans T
Characterization of two cryptic species, Culicoides stigma and C. parroti (Diptera: Ceratopogonidae), based on barcode regions and morphology
Augot D, Ninio C, Akhoundi M, Lehrter V, Couloux A, Jouet D, Depaquit J
J. Vector Ecol. 38 (2), 260-265, 2013
An updated metabolic view of the Bacillus subtilis 168 genome
Belda E, Sekowska A, Le Fevre F, Morgat A, Mornico D, Ouzounis C, Vallenet D, Medigue C, Danchin A
Functional endogenous viral elements in the genome of the parasitoid wasp Cotesia congregata: insights into the evolutionary dynamics of bracoviruses
Bezier A, Louis F, Jancek S, Periquet G, Theze J, Gyapay G, Musset K, Lesobre J, Lenoble P, Dupuy C, Gundersen-Rindal D, Herniou EA, Drezen JM
Characteristics of inteins in invertebrate iridoviruses and factors controlling insertion in their viral hosts
Bigot Y, Piegu B, Casteret S, Gavory F, Bideshi DK, Federici BA
Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay
Bittner L, Gobet A, Audic S, Romac S, Egge ES, Santini S, Ogata H, Probert I, Edvardsen B, de Vargas C
Characterization of rhizosphere prokaryotic diversity in a horizontal subsurface flow constructed wetland using a PCR cloning-sequencing based approach
Bouali M, Pelletier E, Chaussonnerie S, Le Paslier D, Bakhrouf A, Sghir A
Molecular evidence for novel Cantharellus (Cantharellales, Basidiomycota) from tropical African miombo woodland and a key to all tropical African chanterelles
Buyck B, Kauff F, Cruaud C, Hofstetter V
Synthetic biology and society: the point of view of students who took part of the iGEM competition - a scientific's view
Cerisy T
Three Infectious Viral Species Lying in Wait in the Banana Genome
Chabannes M, Baurens FC, Duroy PO, Bocs S, Vernerey MS, Rodier-Goud M, Barbe V, Gayral P, Iskra-Caruana ML
Identification of a Major Locus, TNF1, That Controls BCG-Triggered Tumor Necrosis Factor Production by Leukocytes in an Area Hyperendemic for Tuberculosis
Cobat A, Hoal EG, Gallant CJ, Simkin L, Black GF, Stanley K, Jais JP, Yu TH, Boland-Auge A, Grange G, Delacourt C, van Helden P, Casanova JL, Abel L, Alcais A, Schurr E
Below-ground fine-scale distribution and soil versus fine root detection of fungal and soil oomycete communities in a French beech forest
Coince A, Cael O, Bach C, Lengelle J, Cruaud C, Gavory F, Morin E, Murat C, Marcais B, Buee M
Extensive inter- and intraspecific venom variation in closely related parasites targeting the same host: The case of Leptopilina parasitoids of Drosophila
Colinet D, Deleury E, Anselme C, Cazes D, Poulain J, Azema-Dossat C, Belghazi M, Gatti JL, Poirie M
Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida
Collen J, Porcel B, Carre W, Ball SG, Chaparro C, Tonon T, Barbeyron T, Michel G, Noel B, Valentin K, Elias M, Artiguenave F, Arun A, Aury JM, Barbosa-Neto JF, Bothwell JH, Bouget FY, Brillet L, Cabello-Hurtado F, Capella-Gutierrez S, Charrier B, Cladiere L, Cock JM, Coelho SM, Colleoni C, Czjzek M, Da Silva C, Delage L, Denoeud F, Deschamps P, Dittami SM, Gabaldon T, Gachon CMM, Groisillier A, Herve C, Jabbari K, Katinka M, Kloareg B, Kowalczyk N, Labadie K, Leblanc C, Lopez PJ, McLachlan DH, Meslet-Cladiere L, Moustafa A, Nehr Z, Collen PN, Panaud O, Partensky F, Poulain J, Rensing SA, Rousvoal S, Samson G, Symeonidi A, Weissenbach J, Zambounis A, Wincker P, Boyen C
Evolutionary history of x-tox genes in three lepidopteran species: Origin, evolution of primary and secondary structure and alternative splicing, generating a repertoire of immune-related proteins
d'Alencon E, Bierne N, Girard PA, Magdelenat G, Gimenez S, Seninet I, Escoubas JM
Constraints in the Design of the Synthetic Bacterial Chassis
Danchin A, Sekowska A
Identification of Novel Target Genes for Safer and More Specific Control of Root-Knot Nematodes from a Pan-Genome Mining
Danchin EGJ, Arguel MJ, Campan-Fournier A, Perfus-Barbeoch L, Magliano M, Rosso MN, Da Rocha M, Da Silva C, Nottet N, Labadie K, Guy J, Artiguenave F, Abad P
OikoBase: a genomics and developmental transcriptomics resource for the urochordate Oikopleura dioica
Danks G, Campsteijn C, Parida M, Butcher S, Doddapaneni H, Fu BL, Petrin R, Metpally R, Lenhard B, Wincker P, Chourrout D, Thompson EM, Manak JR
Genome sequence of Xanthomonas fuscans subsp fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads
Darrasse A, Carrere S, Barbe V, Boureau T, Arrieta-Ortiz ML, Bonneau S, Briand M, Brin C, Cociancich S, Durand K, Fouteau S, Gagnevin L, Guerin F, Guy E, Indiana A, Koebnik R, Lauber E, Munoz A, Noel LD, Pieretti I, Poussier S, Pruvost O, Robene-Soustrade I, Rott P, Royer M, Serres-Giardi L, Szurek B, van Sluys MA, Verdier V, Verniere C, Arlat M, Manceau C, Jacques MA
ANALYSING THE CONTRIBUTIONS OF SOCIAL SCIENCES DISCUSSION
de Brem P, Monsan P, Meyer M, Joly PB, Raimbault B, la Salle D, Cointet JP, Weissenbach J, Haiech J, Monsan P
M S-Med. Sci. 29 (), 53-55, 2013
Exploring the genome of the salt-marsh Spartina maritima (Poaceae, Chloridoideae) through BAC end sequence analysis
de Carvalho JF, Chelaifa H, Boutte J, Poulain J, Couloux A, Wincker P, Bellec A, Fourment J, Berges H, Salmon A, Ainouche M
Transcriptome de novo assembly from next-generation sequencing and comparative analyses in the hexaploid salt marsh species Spartina maritima and Spartina alterniflora (Poaceae)
de Carvalho JF, Poulain J, Da Silva C, Wincker P, Michon-Coudouel S, Dheilly A, Naquin D, Boutte J, Salmon A, Ainouche M
Gene Capture Coupled to High-Throughput Sequencing as a Strategy for Targeted Metagenome Exploration
Denonfoux J, Parisot N, Dugat-Bony E, Biderre-Petit C, Boucher D, Morgavi DP, Le Paslier D, Peyretaillade E, Peyret P
Status of the Catalan chub Squalius laietanus (Actinopterygii, Cyprinidae) in France: input from morphological and molecular data
Denys GPJ, Dettai A, Persat H, Doadrio I, Cruaud C, Keith P
BAC-end sequences analysis provides first insights into coffee (Coffea canephora P.) genome composition and evolution
Dereeper A, Guyot R, Tranchant-Dubreuil C, Anthony F, Argout X, de Bellis F, Combes MC, Gavory F, de Kochko A, Kudrna D, Leroy T, Poulain J, Rondeau M, Song X, Wing R, Lashermes P
"The Rhizome of the Multidrug-Resistant Enterobacter aerogenes Genome Reveals How New ""Killer Bugs"" Are Created because of a Sympatric Lifestyle"
Diene SM, Merhej V, Henry M, El Filali A, Roux V, Robert C, Azza S, Gavory F, Barbe V, La Scola B, Raoult D, Rolain JM
Hyposoter didymator uses a combination of passive and active strategies to escape from the Spodoptera frugiperda cellular immune response
Doremus T, Jouan V, Urbach S, Cousserans F, Wincker P, Ravallec M, Wajnberg E, Volkoff AN
Venom gland extract is not required for successful parasitism in the polydnavirus-associated endoparasitoid Hyposoter didymator (Hym. Ichneumonidae) despite the presence of numerous novel and conserved venom proteins
Doremus T, Urbach S, Jouan V, Cousserans F, Ravallec M, Demettre E, Wajnberg E, Poulain J, Azema-Dossat C, Darboux I, Escoubas JM, Colinet D, Gatti JL, Poirie M, Volkoff AN
Evolution of Diadromy in Fish: Insights from a Tropical Genus (Kuhlia Species)
Feutry P, Castelin M, Ovenden JR, Dettai A, Robinet T, Cruaud C, Keith P
Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga
Flot JF, Hespeels B, Li X, Noel B, Arkhipova I, Danchin EGJ, Hejnol A, Henrissat B, Koszul R, Aury JM, Barbe V, Barthelemy RM, Bast J, Bazykin GA, Chabrol O, Couloux A, Da Rocha M, Da Silva C, Gladyshev E, Gouret P, Hallatschek O, Hecox-Lea B, Labadie K, Lejeune B, Piskurek O, Poulain J, Rodriguez F, Ryan JF, Vakhrusheva OA, Wajnberg E, Wirth B, Yushenova I, Kellis M, Kondrashov AS, Welch DBM, Pontarotti P, Weissenbach J, Wincker P, Jaillon O, Van Doninck K
A multi-locus phylogeny suggests an ancient hybridization event between Campephilus and melanerpine woodpeckers (Ayes: Picidae)
Fuchs J, Pons JM, Liu L, Ericson PGP, Couloux A, Pasquet E
Comparative genomics of emerging pathogens in the Candida glabrata clade
Gabaldon T, Martin T, Marcet-Houben M, Durrens P, Bolotin-Fukuhara M, Lespinet O, Arnaise S, Boisnard S, Aguileta G, Atanasova R, Bouchier C, Couloux A, Creno S, Cruz JA, Devillers H, Enache-Angoulvant A, Guitard J, Jaouen L, Ma L, Marck C, Neuveglise C, Pelletier E, Pinard A, Poulain J, Recoquillay J, Westhof E, Wincker P, Dujon B, Hennequin C, Fairhead C
The evolution of north-east Atlantic gadfly petrels using statistical phylogeography
Gangloff B, Zino F, Shirihai H, Gonzalez-Solis J, Couloux A, Pasquet E, Bretagnolle V
Non-invasive ancient DNA protocol for fluid-preserved specimens and phylogenetic systematics of the genus Orestias (Teleostei: Cyprinodontidae)
Garrigos YE, Hugueny B, Koerner K, Ibanez C, Bonillo C, Pruvost P, Causse R, Cruaud C, Gaubert P
Zootaxa 3640 (3), 373-394, 2013
Purifying selection after episodes of recurrent adaptive diversification in fungal pathogens
Gladieux P, Devier B, Aguileta G, Cruaud C, Giraud T
Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo identifies virulence-associated traits
Goudenege D, Labreuche Y, Krin E, Ansquer D, Mangenot S, Calteau A, Medigue C, Mazel D, Polz MF, Le Roux F
Experimental evolution of nodule intracellular infection in legume symbionts
Guan SH, Gris C, Cruveiller S, Pouzet C, Tasse L, Leru A, Maillard A, Medigue C, Batut J, Masson-Boivin C, Capela D
Combining multiple autosomal introns for studying shallow phylogeny and taxonomy of Laurasiatherian mammals: Application to the tribe Bovini (Cetartiodactyla, Bovidae)
Hassanin A, An J, Ropiquet A, Nguyen TT, Couloux A
De Novo Sequencing of Astyanax mexicanus Surface Fish and Pachon Cavefish Transcriptomes Reveals Enrichment of Mutations in Cavefish Putative Eye Genes
Hinaux H, Poulain J, Da Silva C, Noirot C, Jeffery WR, Casane D, Retaux S
Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes
Hingamp P, Grimsley N, Acinas SG, Clerissi C, Subirana L, Poulain J, Ferrera I, Sarmento H, Villar E, Lima-Mendez G, Faust K, Sunagawa S, Claverie JM, Moreau H, Desdevises Y, Bork P, Raes J, de Vargas C, Karsenti E, Kandels-Lewis S, Jaillon O, Not F, Pesant S, Wincker P, Ogata H
The Phylogeny and Biogeographic History of Ashes (Fraxinus, Oleaceae) Highlight the Roles of Migration and Vicariance in the Diversification of Temperate Trees
Hinsinger DD, Basak J, Gaudeul M, Cruaud C, Bertolino P, Frascaria-Lacoste N, Bousquet J
Xq27 FRAXA Locus is a Strong Candidate for Dyslexia: Evidence from a Genome-Wide Scan in French Families
Huc-Chabrolle M, Charon C, Guilmatre A, Vourc'h P, Tripi G, Barthez MA, Sizaret E, Thepault RA, Le Gallic S, Hager J, Toutain A, Raynaud M, Andres C, Campion D, Laumonnier F, Bonnet-Brilhault F
A Tribute to Disorder in the Genome of the Bloom-Forming Freshwater Cyanobacterium Microcystis aeruginosa
Humbert JF, Barbe V, Latifi A, Gugger M, Calteau A, Coursin T, Lajus A, Castelli V, Oztas S, Samson G, Longin C, Medigue C, de Marsac NT
Identification and characterization of functional centromeres of the common bean
Iwata A, Tek AL, Richard MMS, Abernathy B, Fonseca A, Schmutz J, Chen NWG, Thareau V, Magdelenat G, Li YP, Murata M, Pedrosa-Harand A, Geffroy V, Nagaki K, Jackson SA
New status for two African giant forest shrews, Crocidura goliath goliath and C-goliath nimbasilvanus (Mammalia: Soricomorpha), based on molecular and geometic morphometric analyses
Jacquet F, Hutterer R, Nicolas V, Decher J, Colyn M, Couloux A, Denys C
Afr. Zool. 48 (1), 13-29, 2013
Capturing the mutational landscape of the beta-lactamase TEM-1
Jacquier H, Birgy A, Le Nagard H, Mechulam Y, Schmitt E, Glodt J, Bercot B, Petit E, Poulain J, Barnaud G, Gros PA, Tenaillon O
Adaptive Selection on Bracovirus Genomes Drives the Specialization of Cotesia Parasitoid Wasps
Jancek S, Bezier A, Gayral P, Paillusson C, Kaiser L, Dupas S, Le Ru BP, Barbe V, Periquet G, Drezen JM, Herniou EA
Masculinization of the X Chromosome in the Pea Aphid
Jaquiery J, Rispe C, Roze D, Legeai F, Le Trionnaire G, Stoeckel S, Mieuzet L, Da Silva C, Poulain J, Prunier-Leterme N, Segurens B, Tagu D, Simon JC
FliZ Is a Global Regulatory Protein Affecting the Expression of Flagellar and Virulence Genes in Individual Xenorhabdus nematophila Bacterial Cells
Jubelin G, Lanois A, Severac D, Rialle S, Longin C, Gaudriault S, Givaudan A
CHARACTERIZING THE SCIENTIFIC DYNAMICS OF SYNTHETIC BIOLOGY DISCUSSION
Kepes F, de Brem P, Meyer M, Landrain T, Marquet C, la Salle D, Cerisy T, Paradeise C, Boireau P
M S-Med. Sci. 29 (), 38-40, 2013
A metabolic model for members of the genus Tetrasphaera involved in enhanced biological phosphorus removal
Kristiansen R, Nguyen HTT, Saunders AM, Nielsen JL, Wimmer R, Le VQ, McIlroy SJ, Petrovski S, Seviour RJ, Calteau A, Nielsen KL, Nielsen PH
Geographic locality greatly influences fungal endophyte communities in Cephalotaxus harringtonia
Langenfeld A, Prado S, Nay B, Cruaud C, Lacoste S, Bury E, Hachette F, Hosoya T, Dupont J
New nuclear markers and exploration of the relationships among Serraniformes (Acanthomorpha, Teleostei): The importance of working at multiple scales
Lautredou AC, Motomura H, Gallut C, Ozouf-Costaz C, Cruaud C, Lecointre G, Dettai A
Evolutionary history and genetic parallelism affect correlated responses to evolution
Le Gac M, Cooper TF, Cruveiller S, Edigue CM, Schneider D
"Enrichment and Genome Sequence of the Group I. 1a Ammonia-Oxidizing Archaeon ""Ca. Nitrosotenuis uzonensis"" Representing a Clade Globally Distributed in Thermal Habitats"
Lebedeva EV, Hatzenpichler R, Pelletier E, Schuster N, Hauzmayer S, Bulaev A, Grigor'eva NV, Galushko A, Schmid M, Palatinszky M, Le Paslier D, Daims H, Wagner M
Is the Species Flock Concept Operational? The Antarctic Shelf Case
Lecointre G, Ameziane N, Boisselier MC, Bonillo C, Busson F, Causse R, Chenuil A, Couloux A, Coutanceau JP, Cruaud C, d'Acoz CD, De Ridder C, Denys G, Dettai A, Duhamel G, Eleaume M, Feral JP, Gallut C, Havermans C, Held C, Hemery L, Lautredou AC, Martin P, Ozouf-Costaz C, Pierrat B, Pruvost P, Puillandre N, Samadi S, Saucede T, Schubart C, David B
Soil metatranscriptomics for mining eukaryotic heavy metal resistance genes
Lehembre F, Doillon D, David E, Perrotto S, Baude J, Foulon J, Harfouche L, Vallon L, Poulain J, Da Silva C, Wincker P, Oger-Desfeux C, Richaud P, Colpaert JV, Chalot M, Fraissinet-Tachet L, Blaudez D, Marmeisse R
Genome Mining Expands the Chemical Diversity of the Cyanobactin Family to Include Highly Modified Linear Peptides
Leikoski N, Liu LW, Jokela J, Wahlsten M, Gugger M, Calteau A, Permi P, Kerfeld CA, Sivonen K, Fewer DP
Tracing the history and biogeography of the Australian blindsnake radiation
Marin J, Donnellan SC, Hedges SB, Doughty P, Hutchinson MN, Cruaud C, Vidal N
Hidden species diversity of Australian burrowing snakes (Ramphotyphlops)
Marin J, Donnellan SC, Hedges SB, Puillandre N, Aplin KP, Doughty P, Hutchinson MN, Couloux A, Vidal N
Loss of Function of Glucocerebrosidase GBA2 Is Responsible for Motor Neuron Defects in Hereditary Spastic Paraplegia
Martin E, Schule R, Smets K, Rastetter A, Boukhris A, Loureiro JL, Gonzalez MA, Mundwiller E, Deconinck T, Wessner M, Jornea L, Oteyza AC, Durr A, Martin JJ, Schols L, Mhiri C, Lamari F, Zuchner S, De Jonghe P, Kabashi E, Brice A, Stevanin G
The Complete Chloroplast Genome of Banana (Musa acuminata, Zingiberales): Insight into Plastid Monocotyledon Evolution
Martin G, Baurens FC, Cardi C, Aury JM, D'Hont A
Genome-wide transcriptional responses of two metal-tolerant symbiotic Mesorhizobium isolates to Zinc and Cadmium exposure
Maynaud G, Brunel B, Mornico D, Durot M, Severac D, Dubois E, Navarro E, Cleyet-Marel JC, Le Quere A
The ModFOLD4 server for the quality assessment of 3D protein models
McGuffin LJ, Buenavista MT, Roche DB
Complete DNA Sequence of Kuraishia capsulata Illustrates Novel Genomic Features among Budding Yeasts (Saccharomycotina)
Morales L, Noel B, Porcel B, Marcet-Houben M, Hullo MF, Sacerdot C, Tekaia F, Leh-Louis V, Despons L, Khanna V, Aury JM, Barbe V, Couloux A, Labadie K, Pelletier E, Souciet JL, Boekhout T, Gabaldon T, Wincker P, Dujon B
Directed Evolution of a Model Primordial Enzyme Provides Insights into the Development of the Genetic Code
Muller MM, Allison JR, Hongdilokkul N, Gaillon L, Kast P, van Gunsteren WF, Marliere P, Hilvert D
Climate and Soil Type Together Explain the Distribution of Microendemic Species in a Biodiversity Hotspot
Nattier R, Grandcolas P, Pellens R, Jourdan H, Couloux A, Poulain S, Robillard T
Molecular systematics and phylogeography of the tribe Myonycterini (Mammalia, Pteropodidae) inferred from mitochondrial and nuclear markers
Nesi N, Kadjo B, Pourrut X, Leroy E, Shongo CP, Cruaud C, Hassanin A
How Effective Are DNA Barcodes in the Identification of African Rainforest Trees?
Parmentier I, Duminil J, Kuzmina M, Philippe M, Thomas DW, Kenfack D, Chuyong GB, Cruaud C, Hardy OJ
Binary Genetic Cassettes for Selecting XNA-Templated DNA Synthesis In Vivo
Pezo V, Liu FW, Abramov M, Froeyen M, Herdewijn P, Marliere P
A Metabolic Prototype for Eliminating Tryptophan From The Genetic Code
Pezo V, Louis D, Guerineau V, Le Caer JP, Gaillon L, Mutzel R, Marliere P
Complete genome sequence of invertebrate iridescent virus 22 isolated from a blackfly larva
Piegu B, Guizard S, Spears T, Cruaud C, Couloux A, Bideshi DK, Federici BA, Bigot Y
A novel amino acid substitution of integrin alpha IIb in Glanzmann thrombasthenia confirms that the N-terminal region of the receptor plays a role in maintaining beta-propeller structure
Pillois X, Fiore M, Heilig R, Pico M, Nurden AT
Germline BAP1 Mutations Predispose to Renal Cell Carcinomas
Popova T, Hebert L, Jacquemin V, Gad S, Caux-Moncoutier V, Dubois-d'Enghien C, Richaudeau B, Renaudin X, Sellers J, Nicolas A, Sastre-Garau X, Desjardins L, Gyapay G, Raynal V, Sinilnikova OM, Andrieu N, Manie E, de Pauw A, Gesta P, Bonadona V, Maugard CM, Penet C, Avril MF, Barillot E, Cabaret O, Delattre O, Richard S, Caron O, Benfodda M, Hu HH, Soufir N, Bressac-de Paillerets B, Stoppa-Lyonnet D, Stern MH
The First Genomic and Proteomic Characterization of a Deep-Sea Sulfate Reducer: Insights into the Piezophilic Lifestyle of Desulfovibrio piezophilus
Pradel N, Ji BY, Gimenez G, Talla E, Lenoble P, Garel M, Tamburini C, Fourquet P, Lebrun R, Bertin P, Denis Y, Pophillat M, Barbe V, Ollivier B, Dolla A
Structure and Biosynthesis of Fimsbactins A-F, Siderophores from Acinetobacter baumannii and Acinetobacter baylyi
Proschak A, Lubuta P, Grun P, Lohr F, Wilharm G, de Berardinis V, Bode HB
Mutations in CERS3 Cause Autosomal Recessive Congenital Ichthyosis in Humans
Radner FPW, Marrakchi S, Kirchmeier P, Kim GJ, Ribierre F, Kamoun B, Abid L, Leipoldt M, Turki H, Schempp W, Heilig R, Lathrop M, Fischer J
Evolution study of the Baeyer-Villiger monooxygenases enzyme family: Functional importance of the highly conserved residues
Rebehmed J, Alphand V, de Berardinis V, de Brevern AG
The FunFOLD2 server for the prediction of protein-ligand interactions
Roche DB, Buenavista MT, McGuffin LJ
Reductive evolution in Streptococcus agalactiae and the emergence of a host adapted lineage
Rosinski-Chupin I, Sauvage E, Mairey B, Mangenot S, Ma L, Da Cunha V, Rusniok C, Bouchier C, Barbe V, Glaser P
Genome mining reveals the genus Xanthomonas to be a promising reservoir for new bioactive non-ribosomally synthesized peptides
Royer M, Koebnik R, Marguerettaz M, Barbe V, Robin GP, Brin C, Carrere S, Gomez C, Hugelland M, Voller GH, Noell J, Pieretti I, Rausch S, Verdier V, Poussier S, Rott P, Sussmuth RD, Cociancich S
Genome of Phaeocystis globosa virus PgV-16T highlights the common ancestry of the largest known DNA viruses infecting eukaryotes
Santini S, Jeudy S, Bartoli J, Poirot O, Lescot M, Abergel C, Barbe V, Wommack KE, Noordeloos AAM, Brussaard CPD, Claverie JM
Positive selection of protective variants for type 2 diabetes from the Neolithic onward: a case study in Central Asia
Segurel L, Austerlitz F, Toupance B, Gautier M, Kelley JL, Pasquet P, Lonjou C, Georges M, Voisin S, Cruaud C, Couloux A, Hegay T, Aldashev A, Vitalis R, Heyer E
Connecting known and new metabolic pathways related to purine bases catabolism through a transcriptomic analysis of the soil bacterium Acinetobacter baylyi ADP1
Segurens B, de Berardinis V, Besnard M, Petit JL, Salanoubat M, Fischer C
FEBS J. 280 (), 180-180, 2013
Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
Shih PM, Wu DY, Latifi A, Axen SD, Fewer DP, Talla E, Calteau A, Cai F, de Marsac NT, Rippka R, Herdman M, Sivonen K, Coursin T, Laurent T, Goodwin L, Nolan M, Davenport KW, Han CS, Rubin EM, Eisen JA, Woyke T, Gugger M, Kerfeld CA
Species Diversity, Phylogeny and Large Scale Biogeographic Patterns of the Genus Padina (Phaeophyceae, Dictyotales)
Silberfeld T, Bittner L, Fernandez-Garcia C, Cruaud C, RousseaU F, de Reviers B, Leliaert F, Payri CE, De Clerck O
Synthesis of Specially Designed Probes to Broaden Transketolase Scope
Simon G, Eljezi T, Legeret B, Charmantray F, Castillo JA, Guerard-Helaine C, Lemaire M, Bouzon M, Marliere P, Helaine V, Hecquet L
Sequencing platform and library preparation choices impact viral metagenomes
Solonenko SA, Ignacio-Espinoza JC, Alberti A, Cruaud C, Hallam S, Konstantinidis K, Tyson G, Wincker P, Sullivan MB
Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies
Sugawara M, Epstein B, Badgley BD, Unno T, Xu L, Reese J, Gyaneshwar P, Denny R, Mudge J, Bharti AK, Farmer AD, May GD, Woodward JE, Medigue C, Vallenet D, Lajus A, Rouy Z, Martinez-Vaz B, Tiffin P, Young ND, Sadowsky MJ
Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis
Supply P, Marceau M, Mangenot S, Roche D, Rouanet C, Khanna V, Majlessi L, Criscuolo A, Tap J, Pawlik A, Fiette L, Orgeur M, Fabre M, Parmentier C, Frigui W, Simeone R, Boritsch EC, Debrie AS, Willery E, Walker D, Quail MA, Ma L, Bouchier C, Salvignol G, Sayes F, Cascioferro A, Seemann T, Barbe V, Locht C, Gutierrez MC, Leclerc C, Bentley SD, Stinear TP, Brisse S, Medigue C, Parkhill J, Cruveiller S, Brosch R
Integrative Biology of Idas iwaotakii (Habe, 1958), a 'Model Species' Associated with Sunken Organic Substrates
Thubaut J, Corbari L, Gros O, Duperron S, Couloux A, Samadi S
The contrasted evolutionary fates of deep-sea chemosynthetic mussels (Bivalvia, Bathymodiolinae)
Thubaut J, Puillandre N, Faure B, Cruaud C, Samadi S
MicroScope-an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data
Vallenet D, Belda E, Calteau A, Cruveiller S, Engelen S, Lajus A, Le Fevre F, Longin C, Mornico D, Roche D, Rouy Z, Salvignol G, Scarpelli C, Smith AAT, Weiman M, Medigue C
Nitrilase Activity Screening on Structurally Diverse Substrates: Providing Biocatalytic Tools for Organic Synthesis
Vergne-Vaxelaire C, Bordier F, Fossey A, Besnard-Gonnet M, Debard A, Mariage A, Pellouin V, Perret A, Petit JL, Stam M, Salanoubat M, Weissenbach J, de Berardinis V, Zaparucha A
Gene Amplification and Functional Diversification of Melanocortin 4 Receptor at an Extremely Polymorphic Locus Controlling Sexual Maturation in the Platyfish
Volff JN, Selz Y, Hoffmann C, Froschauer A, Schultheis C, Schmidt C, Zhou QC, Bernhardt W, Hanel R, Bohne A, Brunet F, Segurens B, Couloux A, Bernard-Samain S, Barbe V, Ozouf-Costaz C, Galiana D, Lohse MJ, Schartl M
Mutation rate dynamics in a bacterial population reflect tension between adaptation and genetic load
Wielgoss S, Barrick JE, Tenaillon O, Wiser MJ, Dittmar WJ, Cruveiller S, Chane-Woon-Ming B, Medigue C, Lenski RE, Schneider D
Genomics and fruit crop selection
Wincker P
The Nocardia cyriacigeorgica GUH-2 genome shows ongoing adaptation of an environmental Actinobacteria to a pathogen's lifestyle
Zoropogui A, Pujic P, Normand P, Barbe V, Belli P, Graindorge A, Roche D, Vallenet D, Mangenot S, Boiron P, Rodriguez-Nava V, Ribun S, Richard Y, Cournoyer B, Blaha D
Insights into the 1.59-Mbp largest plasmid of Azospirillum brasilense CBG497
Acosta-Cruz E, Wisniewski-Dye F, Rouy Z, Barbe V, Valdes M, Mavingui P
Genes under positive selection in a model plant pathogenic fungus, Botrytis
Aguileta G, Lengelle J, Chiapello H, Giraud T, Viaud M, Fournier E, Rodolphe F, Marthey S, Ducasse A, Gendrault A, Poulain J, Wincker P, Gout L
Rhea-a manually curated resource of biochemical reactions
Alcantara R, Axelsen K B, Morgat A, Belda E, Coudert E, Bridge A, Cao H, de Matos P, Ennis M, Turner S, Owen G, Bougueleret L, Xenarios I, Steinbeck C
Differentiating Alstrom from Bardet-Biedl syndrome (BBS) using systematic ciliopathy genes sequencing
Aliferis K, Helle S, Gyapay G, Duchatelet S, Stoetzel C, Mandel J L, Dollfus H
Genome Sequence of Micromonospora lupini Lupac 08, Isolated from Root Nodules of Lupinus angustifolius
Alonso-Vega P, Normand P, Bacigalupe R, Pujic P, Lajus A, Vallenet D, Carro L, Coll P, Trujillo ME
Nucleotide Composition of CO1 Sequences in Chelicerata (Arthropoda): Detecting New Mitogenomic Rearrangements
Arabi J, Judson M L I, Deharveng L, Lourenco W R, Cruaud C, Hassanin A
Deciduous Trees and the Application of Universal DNA Barcodes: A Case Study on the Circumpolar Fraxinus
Arca M, Hinsinger D D, Cruaud C, Tillier A, Bousquet J, Frascaria-Lacoste N
The Paramecium Germline Genome Provides a Niche for Intragenic Parasitic DNA: Evolutionary Dynamics of Internal Eliminated Sequences
Arnaiz O, Mathy N, Baudry C, Malinsky S, Aury JM, Wilkes CD, Garnier O, Labadie K, Lauderdale BE, Le Mouel A, Marmignon A, Nowacki M, Poulain J, Prajer M, Wincker P, Meyer E, Duharcourt S, Duret L, Betermier M, Sperling L
Complete Genome Sequence of the Highly Hemolytic Strain Bacillus cereus F837/76
Auger S, Galleron N, Segurens B, Dossat C, Bolotin A, Wincker P, Sorokin A
Sequence variation and mRNA expression of the TWIST1 gene in cats with mammary hyperplasia and neoplasia
Baptista C S, Santos S, Laso A, Bastos E, Avila S, Guedes-Pinto H, Gartner F, Gut I G, Castrillo J L, Chaves R
Using functional traits and phylogenetic trees to examine the assembly of tropical tree communities
Baraloto C, Hardy O J, Paine C E T, Dexter K G, Cruaud C, Dunning L T, Gonzalez M A, Molino J F, Sabatier D, Savolainen V, Chave J
Complete Genome Sequence of Flavobacterium indicum GPSTA100-9T, Isolated from Warm Spring Water
Barbier P, Houel A, Loux V, Poulain J, Bernardet J F, Touchon M, Duchaud E
ESTs library from embryonic stages reveals tubulin and reflectin diversity in Sepia officinalis (Mollusca - Cephalopoda)
Bassaglia Y, Bekel T, Da Silva C, Poulain J, Andouche A, Navet S, Bonnaud L
Endogeic earthworms shape bacterial functional communities and affect organic matter mineralization in a tropical soil
Bernard L, Chapuis-Lardy L, Razafimbelo T, Razafindrakoto M, Pablo A L, Legname E, Poulain J, Bruls T, O'Donohue M, Brauman A, Chotte J L, Blanchart E
A REFERENCE MICROSATELLITE KIT TO ASSESS FOR GENETIC DIVERSITY OF SORGHUM BICOLOR (POACEAE)
Billot C, Rivallan R, Sall MN, Fonceka D, Deu M, Glaszmann JC, Noyer JL, Rami JF, Risterucci AM, Wincker P, Ramu P, Hash CT
Coprolites as a source of information on the genome and diet of the cave hyena
Bon C, Berthonaud V, Maksud F, Labadie K, Poulain J, Artiguenave F, Wincker P, Aury JM, Elalouf JM
The structure and spatio-temporal distribution of the Archaea in a horizontal subsurface flow constructed wetland
Bouali M, Zrafi-Nouira I, Bakhrouf A, Le Paslier D, Chaussonnerie S, Ammar E, Sghir A
Specific TGM1 Mutation Profiles in Bathing Suit and Self-Improving Collodion Ichthyoses Phenotypic and Genotypic Data From 9 Patients With Dynamic Phenotypes of Autosomal Recessive Congenital Ichthyosis
Bourrat E, Blanchet-Bardon C, Derbois C, Cure S, Fischer J
orthodenticle/otx ortholog expression in the anterior brain and eyes of Sepia officinalis (Mollusca, Cephalopoda)
Buresi A, Baratte S, Da Silva C, Bonnaud L
Speciation patterns in gastropods with long-lived larvae from deep-sea seamounts
Castelin M, Lorion J, Brisset J, Cruaud C, Maestrati P, Utge J, Samadi S
Macroevolution of venom apparatus innovations in auger snails (Gastropoda. Conoidea. Terebridae)
Castelin M, Puillandre N, Kantor YI, Modica MV, Terryn Y, Cruaud C, Bouchet P, Holford M
Feminizing Wolbachia: a transcriptomics approach with insights on the immune response genes in Armadillidium vulgare
Chevalier F, Herbiniere-Gaboreau J, Charif D, Mitta G, Gavory F, Wincker P, Greve P, Braquart-Varnier C, Bouchon D
Genome Sequence of Blastococcus saxobsidens DD2, a Stone-Inhabiting Bacterium
Chouaia B, Crotti E, Brusetti L, Daffonchio D, Essoussi I, Nouioui I, Sbissi I, Ghodhbane-Gtari F, Gtari M, Vacherie B, Barbe V, Medigue C, Gury J, Pujic P, Normand P
The Ectocarpus Genome and Brown Algal Genomics The Ectocarpus Genome Consortium
Cock JM, Sterck L, Ahmed S, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Arun A, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Le Corguille G, Corre E, Dartevelle L, Da Silva C, Delage L, Delaroque N, Dittami SM, Doulbeau S, Elias M, Farnham G, Gachon CMM, Godfroy O, Gschloessl B, Heesch S, Jabbari K, Jubin C, Kawai H, Kimura K, Kloareg B, Kuepper FC, Lang D, Le Bail A, Luthringer R, Leblanc C, Lerouge P, Lohr M, Lopez PJ, Macaisne N, Martens C, Maumus F, Michel G, Miranda-Saavedra D, Morales J, Moreau H, Motomura T, Nagasato C, Napoli CA, Nelson DR, Nyvall-Collen P, Peters AF, Pommier C, Potin P, Poulain J, Quesneville H, Read B, Rensing SA, Ritter A, Rousvoal S, Samanta M, Samson G, Schroeder DC, Scornet D, Segurens B, Strittmatter M, Tonon T, Tregear JW, Valentin K, von Dassow P, Yamagishi T, Rouze P, Van de Peer Y, Wincker P
THE CHONDRUS CRISPUS GENOME AND THE DEVELOPMENT OF A FLORIDEOPHYTE MODEL
Collen J, Boyen C, Porcel B, Wincker P
J. Phycol. 48 (), S2-S2, 2012
Features of the Arabidopsis recombination landscape resulting from the combined loss of sequence variation and DNA methylation
Colome-Tatche M, Cortijo S, Wardenaar R, Morgado L, Lahouze B, Sarazin A, Etcheverry M, Martin A, Feng SH, Duvernois-Berthet E, Labadie K, Wincker P, Jacobsen SE, Jansen RC, Colot V, Johannes F
Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti(dagger)
Cornillot E, Hadj-Kaddour K, Dassouli A, Noel B, Ranwez V, Vacherie B, Augagneur Y, Bres V, Duclos A, Randazzo S, Carcy B, Debierre-Grockiego F, Delbecq S, Moubri-Menage K, Shams-Eldin H, Usmani-Brown S, Bringaud F, Wincker P, Vivares CP, Schwarz RT, Schetters TP, Krause PJ, Gorenflot A, Berry V, Barbe V, Ben Mamoun C
An Extreme Case of Plant-Insect Codiversification: Figs and Fig-Pollinating Wasps
Cruaud A, Ronsted N, Chantarasuwan B, Chou LS, Clement WL, Couloux A, Cousins B, Genson G, Harrison RD, Hanson PE, Hossaert-Mckey M, Jabbour-Zahab R, Jousselin E, Kerdelhue C, Kjellberg F, Lopez-Vaamonde C, Peebles J, Peng YQ, Pereira RAS, Schramm T, Ubaidillah R, van Noort S, Weiblen GD, Yang DR, Yodpinyanee A, Libeskind-Hadas R, Cook JM, Rasplus JY, Savolainen V
Structure, fluctuation and magnitude of a natural grassland soil metagenome
Delmont TO, Prestat E, Keegan KP, Faubladier M, Robe P, Clark IM, Pelletier E, Hirsch PR, Meyer F, Gilbert JA, Le Paslier D, Simonet P, Vogel TM
Identification of molecular markers for DNA barcoding in the Aphidiinae (Hym. Braconidae)
Derocles S A P, Le Ralec A, Plantegenest M, Chaubet B, Cruaud C, Cruaud A, Rasplus J Y
Tracking the elusive monophyly of nototheniid fishes (Teleostei) with multiple mitochondrial and nuclear markers
Dettai A, Berkani M, Lautredou AC, Couloux A, Lecointre G, Ozouf-Costaz C, Gallut C
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants
D'Hont A, Denoeud F, Aury JM, Baurens FC, Carreel F, Garsmeur O, Noel B, Bocs S, Droc G, Rouard M, Da Silva C, Jabbari K, Cardi C, Poulain J, Souquet M, Labadie K, Jourda C, Lengelle J, Rodier-Goud M, Alberti A, Bernard M, Correa M, Ayyampalayam S, Mckain MR, Leebens-Mack J, Burgess D, Freeling M, Mbeguie-A-Mbeguie D, Chabannes M, Wicker T, Panaud O, Barbosa J, Hribova E, Heslop-Harrison P, Habas R, Rivallan R, Francois P, Poiron C, Kilian A, Burthia D, Jenny C, Bakry F, Brown S, Guignon V, Kema G, Dita M, Waalwijk C, Joseph S, Dievart A, Jaillon O, Leclercq J, Argout X, Lyons E, Almeida A, Jeridi M, Dolezel J, Roux N, Risterucci AM, Weissenbach J, Ruiz M, Glaszmann JC, Quetier F, Yahiaoui N, Wincker P
ELM-the database of eukaryotic linear motifs
Dinkel H, Michael S, Weatheritt R J, Davey N E, Van Roey K, Altenberg B, Toedt G, Uyar B, Seiler M, Budd A, Jodicke L, Dammert M A, Schroeter C, Hammer M, Schmidt T, Jehl P, McGuigan C, Dymecka M, Chica C, Luck K, Via A, Chatr-Aryamontri A, Haslam N, Grebnev G, Edwards R J, Steinmetz M O, Meiselbach H, Diella F, Gibson T J
Genomic Comparison of Rickettsia helvetica and Other Rickettsia Species
Dong X, El Karkouri K, Robert C, Gavory F, Raoult D, Fournier P E
"Evolutionary History of Contagious Bovine Pleuropneumonia Using Next Generation Sequencing of Mycoplasma mycoides Subsp mycoides ""Small Colony''"
Dupuy V, Manso-Silvan L, Barbe V, Thebault P, Dordet-Frisoni E, Citti C, Poumarat F, Blanchard A, Breton M, Sirand-Pugnet P, Thiaucourt F
Draft Genome Sequence of the Purple Photosynthetic Bacterium Phaeospirillum molischianum DSM120, a Particularly Versatile Bacterium
Duquesne K, Prima V, Ji B, Rouy Z, Medigue C, Talla E, Sturgis JN
Distinct co-evolution patterns of genes associated to DNA polymerase III DnaE and PolC
Engelen S, Vallenet D, Medigue C, Danchin A
454-pyrosequencing of Coffea arabica leaves infected by the rust fungus Hemileia vastatrix reveals in planta-expressed pathogen-secreted proteins and plant functions in a late compatible plant-rust interaction
Fernandez D, Tisserant E, Talhinhas P, Azinheira H, Vieira A, Petitot A S, Loureiro A, Poulain J, Da Silva C, Silva M D C, Duplessis S
First record of Kuhlia sauvagii Regan, 1913 (Perciformes) in Mayotte and Reunion islands, Western Indian Ocean
Feutry P, Castelin M, Grondin H, Cruaud C, Couloux A, Keith P
Cybium 36 (3), 493-494, 2012
Complete Genome Sequence of Rickettsia slovaca, the Agent of Tick-Borne Lymphadenitis
Fournier P E, El Karkouri K, Robert C, Medigue C, Raoult D
Molecular phylogeny of African bush-shrikes and allies: Tracing the biogeographic history of an explosive radiation of corvoid birds
Fuchs J, Irestedt M, Fjeldsa J, Couloux A, Pasquet E, Bowie RCK
The complete phylogeny of Pseudobulweria, the most endangered seabird genus: systematics, species status and conservation implications
Gangloff B, Shirihai H, Watling D, Cruaud C, Couloux A, Tillier A, Pasquet E, Bretagnolle V
Reviving the African Wolf Canis lupus lupaster in North and West Africa: A Mitochondrial Lineage Ranging More than 6,000 km Wide
Gaubert P, Bloch C, Benyacoub S, Abdelhamid A, Pagani P, Djagoun Cams, Couloux A, Dufour S
The genome of the obligate endobacterium of an AM fungus reveals an interphylum network of nutritional interactions
Ghignone S, Salvioli A, Anca I, Lumini E, Ortu G, Petiti L, Cruveiller S, Bianciotto V, Piffanelli P, Lanfranco L, Bonfante P
A novel genetic selection system for PLP-dependent threonine aldolases
Giger L, Toscano MD, Bouzon M, Marliere P, Hilvert D
Genomic content of uncultured Bacteroidetes from contrasting oceanic provinces in the North Atlantic Ocean
Gomez-Pereira P R, Schuler M, Fuchs B M, Bennke C, Teeling H, Waldmann J, Richter M, Barbe V, Bataille E, Glockner F O, Amann R
Contrasted Patterns of Molecular Evolution in Dominant and Recessive Self-Incompatibility Haplotypes in Arabidopsis
Goubet P M, Berges H, Bellec A, Prat E, Helmstetter N, Mangenot S, Gallina S, Holl A C, Fobis-Loisy I, Vekemans X, Castric V
Genome Sequence of the Marine Bacterium Marinobacter hydrocarbonoclasticus SP17, Which Forms Biofilms on Hydrophobic Organic Compounds
Grimaud R, Ghiglione JF, Cagnon C, Lauga B, Vaysse PJ, Rodriguez-Blanco A, Mangenot S, Cruveiller S, Barbe V, Duran R, Wu LF, Talla E, Bonin P, Michotey V
SEMA3A, a Gene Involved in Axonal Pathfinding, Is Mutated in Patients with Kallmann Syndrome
Hanchate NK, Giacobini P, Lhuillier P, Parkash J, Espy C, Fouveaut C, Leroy C, Baron S, Campagne C, Vanacker C, Collier F, Cruaud C, Meyer V, Garcia-Pinero A, Dewailly D, Cortet-Rudelli C, Gersak K, Metz C, Chabrier G, Pugeat M, Young J, Hardelin JP, Prevot V, Dode C
Pattern and timing of diversification of Cetartiodactyla (Mammalia, Laurasiatheria), as revealed by a comprehensive analysis of mitochondrial genomes
Hassanin A, Delsuc F, Ropiquet A, Hammer C, van Vuuren BJ, Matthee C, Ruiz-Garcia M, Catzeflis F, Areskoug V, Nguyen TT, Couloux A
Comprehensive sampling reveals circumpolarity and sympatry in seven mitochondrial lineages of the Southern Ocean crinoid species Promachocrinus kerguelensis (Echinodermata)
Hemery L G, Eleaume M, Roussel V, Ameziane N, Gallut C, Steinke D, Cruaud C, Couloux A, Wilson N G
What if esca disease of grapevine were not a fungal disease?
Hofstetter V, Buyck B, Croll D, Viret O, Couloux A, Gindro K
Barcoding, molecular taxonomy, and exploration of the diversity of shrews (Soricomorpha: Soricidae) on Mount Nimba (Guinea)
Jacquet F, Nicolas V, Bonillo C, Cruaud C, Denys C
Candidate chemosensory Genes in Female Antennae of the Noctuid Moth Spodoptera littoralis
Jacquin-Joly E, Legeai F, Montagne N, Monsempes C, Francois MC, Poulain J, Gavory F, Walker WB, Hansson BS, Larsson MC
Testing concordance in species boundaries using acoustic, morphological, and molecular data in the field cricket genus Itaropsis (Orthoptera: Grylloidea, Gryllidae: Gryllinae)
Jaiswara R, Balakrishnan R, Robillard T, Rao K, Cruaud C, Desutter-Grandcolas L
Proteome Adaptation to High Temperatures in the Ectothermic Hydrothermal Vent Pompeii Worm
Jollivet D, Mary J, Gagniere N, Tanguy A, Fontanillas E, Boutet I, Hourdez S, Segurens B, Weissenbach J, Poch O, Lecompte O
Draft Genome Sequence of the Volcano-Inhabiting Thermoacidophilic Methanotroph Methylacidiphilum fumariolicum Strain SolV
Khadem AF, Wieczorek AS, Pol A, Vuilleumier S, Harhangi HR, Dunfield PF, Kalyuzhnaya MG, Murrell JC, Francoijs KJ, Stunnenberg HG, Stein LY, DiSpirito AA, Semrau JD, Lajus A, Medigue C, Klotz MG, Jetten MSM, Op den Camp HJM
KIF1A missense mutations in SPG30, an autosomal recessive spastic paraplegia: distinct phenotypes according to the nature of the mutations
Klebe S, Lossos A, Azzedine H, Mundwiller E, Sheffer R, Gaussen M, Marelli C, Nawara M, Carpentier W, Meyer V, Rastetter A, Martin E, Bouteiller D, Orlando L, Gyapay G, El-Hachimi K H, Zimmerman B, Gamliel M, Misk A, Lerer I, Brice A, Durr A, Stevanin G
Influence of Wolbachia on host gene expression in an obligatory symbiosis
Kremer N, Charif D, Henri H, Gavory F, Wincker P, Mavingui P, Vavre F
Phylogenetic footprints of an Antarctic radiation: The Trematominae (Notothenioidei, Teleostei)
Lautredou AC, Hinsinger DD, Gallut C, Cheng CHC, Berkani M, Ozouf-Costaz C, Cruaud C, Lecointre G, Dettai A
"Workshop report ""Genomic research practices and the economy of data production and management"""
Le Ber P, Peerbaye A
Identification of IL7RA Risk Alleles for Rapid Progression During HIV-1 Infection: A Comprehensive Study in the GRIV Cohort
Limou S, Melica G, Coulonges C, Lelievre J D, Do H, McGinn S, Gut I G, Levy Y, Zagury J F
CURRENT HIV RESEARCH 10 (2), 143-150, 2012
From endemism to widespread distribution: phylogeography of three amphidromous Sicyopterus species (Teleostei: Gobioidei: Sicydiinae)
Lord C, Lorion J, Dettai A, Watanabe S, Tsukamoto K, Cruaud C, Keith P
Evolutionary history of Idas sp Med (Bivalvia: Mytilidae), a cold seep mussel bearing multiple symbionts
Lorion J, Halary S, do Nasciment J, Samadi S, Couloux A, Duperron S
CAHIERS DE BIOLOGIE MARINE 53 (1), 77-87, 2012
Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization
Louis VL, Despons L, Friedrich A, Martin T, Durrens P, Casaregola S, Neuveglise C, Fairhead C, Marck C, Cruz JA, Straub ML, Kugler V, Sacerdot C, Uzunov Z, Thierry A, Weiss S, Bleykasten C, De Montigny J, Jacques N, Jung P, Lemaire M, Mallet S, Morel G, Richard GF, Sarkar A, Savel G, Schacherer J, Seret ML, Talla E, Samson G, Jubin C, Poulain J, Vacherie B, Barbe V, Pelletier E, Sherman DJ, Westhof E, Weissenbach J, Baret PV, Wincker P, Gaillardin C, Dujon B, Souciet JL
Betaproteobacteria dominance and diversity shifts in the bacterial community of a PAH-contaminated soil exposed to phenanthrene
Martin F, Torelli S, Le Paslier D, Barbance A, Martin-Laurent F, Bru D, Geremia R, Blake G, Jouanneau Y
Ribo-Polymerase Chain Reaction-A Facile Method for the Preparation of Chimeric RNA/DNA Applied to DNA Sequencing
Mauger F, Bauer K, Semhoun J, Myers T W, Gelfand D H, Gut I G
Whole-Genome Sequence of Wolbachia Strain wAlbB, an Endosymbiont of Tiger Mosquito Vector Aedes albopictus
Mavingui P, Moro C V, Van T V, Wisniewski-Dye F, Raquin V, Minard G, Tran F H, Voronin D, Rouy Z, Bustos P, Lozano L, Barbe V, Gonzalez V
Microbial urate catabolism: characterization of HpyO, a non-homologous isofunctional isoform of the flavoprotein urate hydroxylase HpxO
Michiel M, Perchat N, Perret A, Tricot S, Papeil A, Besnard M, de Berardinis V, Salanoubat M, Fischer C
Systematics and diversification of Praomys species (Rodentia: Muridae) endemic to the Cameroon Volcanic Line (West Central Africa)
Missoup AD, Nicolas V, Wendelen W, Keming E, Bilong CFB, Couloux A, Atanga E, Hutterer R, Denys C
Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage
Moreau H, Verhelst B, Couloux A, Derelle E, Rombauts S, Grimsley N, Van Bel M, Poulain J, Katinka M, Hohmann-Marriott MF, Piganeau G, Rouze P, Da Silva C, Wincker P, Van de Peer Y, Vandepoele K
Comparative Genomics of Aeschynomene Symbionts: Insights into the Ecological Lifestyle of Nod-Independent Photosynthetic Bradyrhizobia
Mornico D, Miche L, Béna G, Nouwen N, Verméglio A, Vallenet D, Smith A A T, Giraud E, Médigue C, Moulin L
Secondary Sympatry Caused by Range Expansion Informs on the Dynamics of Microendemism in a Biodiversity Hotspot
Nattier R, Grandcolas P, Elias M, Desutter-Grandcolas L, Jourdan H, Couloux A, Robillard T
A Remarkable Case of Micro-Endemism in Laonastes aenigmamus (Diatomyidae, Rodentia) Revealed by Nuclear and Mitochondrial DNA Sequence Data
Nicolas V, Herbreteau V, Couloux A, Keovichit K, Douangboupha B, Hugot JP
West-Central African Pleistocene lowland forest evolution revealed by the phylogeography of Misonne's soft-furred mouse
Nicolas V, Missoup AD, Colyn M, Cruaud C, Denys C
Afr. Zool. 47 (1), 100-112, 2012
Assessment of Three Mitochondrial Genes (16S, Cytb, CO1) for Identifying Species in the Praomyini Tribe (Rodentia: Muridae)
Nicolas V, Schaeffer B, Missoup AD, Kennis J, Colyn M, Denys C, Tatard C, Cruaud C, Laredo C
Genome Sequence of Radiation-Resistant Modestobacter marinus Strain BC501, a Representative Actinobacterium That Thrives on Calcareous Stone Surfaces
Normand P, Gury J, Pujic P, Chouaia B, Crotti E, Brusetti L, Daffonchio D, Vacherie B, Barbe V, Medigue C, Calteau A, Ghodhbane-Gtari F, Essoussi I, Nouioui I, Abbassi-Ghozzi I, Gtari M
Comparison of Gene Repertoires and Patterns of Evolutionary Rates in Eight Aphid Species That Differ by Reproductive Mode
Ollivier M, Gabaldon T, Poulain J, Gavory F, Leterme N, Gauthier J P, Legeai F, Tagu D, Simon J C, Rispe C
Deep-Sea Origin and In-Situ Diversification of Chrysogorgiid Octocorals
Pante E, France SC, Couloux A, Cruaud C, McFadden CS, Samadi S, Watling L
LINKAGE TO THE MATING-TYPE LOCUS ACROSS THE GENUS MICROBOTRYUM: INSIGHTS INTO NONRECOMBINING CHROMOSOMES
Petit E, Giraud T, de Vienne DM, Coelho MA, Aguileta G, Amselem J, Kreplak J, Poulain J, Gavory F, Wincker P, Young SK, Cuomo C, Perlin MH, Hood ME
RNA-Seq of Early-Infected Poplar Leaves by the Rust Pathogen Melampsora larici-populina Uncovers PtSultr3.5, a Fungal-Induced Host Sulfate Transporter
Petre B, Morin E, Tisserant E, Hacquard S, Da Silva C, Poulain J, Delaruelle C, Martin F, Rouhier N, Kohler A, Duplessis S
Annotation of microsporidian genomes using transcriptional signals
Peyretaillade E, Parisot N, Polonais V, Terrat S, Denonfoux J, Dugat-Bony E, Wawrzyniak I, Biderre-Petit C, Mahul A, Rimour S, Goncalves O, Bornes S, Delbac F, Chebance B, Duprat S, Samson G, Katinka M, Weissenbach J, Wincker P, Peyret P
Whole Genome Profiling provides a robust framework for physical mapping and sequencing in the highly complex and repetitive wheat genome
Philippe R, Choulet F, Paux E, van Oeveren J, Tang JF, Wittenberg AHJ, Janssen A, van Eijk MJT, Stormo K, Alberti A, Wincker P, Akhunov E, van der Vossen E, Feuillet C
Genomic insights into strategies used by Xanthomonas albilineans with its reduced artillery to spread within sugarcane xylem vessels
Pieretti I, Royer M, Barbe V, Carrere S, Koebnik R, Couloux A, Darrasse A, Gouzy J, Jacques MA, Lauber E, Manceau C, Mangenot S, Poussier S, Segurens B, Szurek B, Verdier V, Arlat M, Gabriel DW, Rott P, Cociancich S
Large-scale species delimitation method for hyperdiverse groups
Puillandre N, Modica M V, Zhang Y, Sirovich L, Boisselier M C, Cruaud C, Holford M, Samadi S
Sequencing of K60, Type Strain of the Major Plant Pathogen Ralstonia solanacearum
Remenant B, Babujee L, Lajus A, Medigue C, Prior P, Allen C
A taxonomic and ecological overview of cheese fungi
Ropars J, Cruaud C, Lacoste S, Dupont J
FSAB: A new fructose-6-phosphate aldolase from Escherichia coli. Cloning, over-expression and comparative kinetic characterization with FSAA
Sanchez-Moreno I, Nauton L, Thery V, Pinet A, Petit JL, de Berardinis V, Samland AK, Guerard-Helaine C, Lemaire M
Are all species of Pseudorhabdosynochus strictly host specific? - A molecular study
Schoelinck C, Cruaud C, Justine J L
Surface-associated motility, a common trait of clinical isolates of Acinetobacter baumannii, depends on 1,3-diaminopropane
Skiebe E, de Berardinis V, Morczinek P, Kerrinnes T, Faber F, Lepka D, Hammer B, Zimmermann O, Ziesing S, Wichelhaus TA, Hunfeld KP, Borgmann S, Grobner S, Higgins PG, Seifert H, Busse HJ, Witte W, Pfeifer Y, Wilharm G
The CanOE Strategy: Integrating Genomic and Metabolic Contexts across Multiple Prokaryote Genomes to Find Candidate Genes for Orphan Enzymes
Smith AAT, Belda E, Viari A, Medigue C, Vallenet D
Nitrification expanded: discovery, physiology and genomics of a nitrite-oxidizing bacterium from the phylum Chloroflexi
Sorokin DY, Lucker S, Vejmelkova D, Kostrikina NA, Kleerebezem R, Rijpstra WIC, Damste JSS, Le Paslier D, Muyzer G, Wagner M, van Loosdrecht MCM, Daims H
In and out of Madagascar: Dispersal to Peripheral Islands, Insular Speciation and Diversification of Indian Ocean Daisy Trees (Psiadia, Asteraceae)
Strijk JS, Noyes RD, Strasberg D, Cruaud C, Gavory F, Chase MW, Abbott RJ, Thebaud C
Expression sequence tag library derived from peripheral blood mononuclear cells of the chlorocebus sabaeus
Tchitchek N, Jacquelin B, Wincker P, Dossat C, Da Silva C, Weissenbach J, Blancher A, Muller-Trutwin M, Benecke A
Molecular biomass and MetaTaxogenomic assessment of soil microbial communities as influenced by soil DNA extraction procedure
Terrat S, Christen R, Dequiedt S, Lelievre M, Nowak V, Regnier T, Bachar D, Plassart P, Wincker P, Jolivet C, Bispo A, Lemanceau P, Maron P A, Mougel C, Ranjard L
Alteration of Fatty-Acid-Metabolizing Enzymes Affects Mitochondrial Form and Function in Hereditary Spastic Paraplegia
Tesson C, Nawara M, Salih MAM, Rossignol R, Zaki MS, Al Balwi M, Schule R, Mignot C, Obre E, Bouhouche A, Santorelli FM, Durand CM, Oteyza AC, El-Hachimi KH, Al Drees A, Bouslam N, Lamari F, Elmalik SA, Kabiraj MM, Seidahmed MZ, Esteves T, Gaussen M, Monin ML, Gyapay G, Lechner D, Gonzalez M, Depienne C, Mochel F, Lavie J, Schols L, Lacombe D, Yahyaoui M, Al Abdulkareem I, Zuchner S, Yamashita A, Benomar A, Goizet C, Durr A, Gleeson JG, Darios F, Brice A, Stevanin G
The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont
Tisserant E, Kohler A, Dozolme-Seddas P, Balestrini R, Benabdellah K, Colard A, Croll D, Da Silva C, Gomez S K, Koul R, Ferrol N, Fiorilli V, Formey D, Franken P, Helber N, Hijri M, Lanfranco L, Lindquist E, Liu Y, Malbreil M, Morin E, Poulain J, Shapiro H, van Tuinen D, Waschke A, Azcon-Aguilar C, Becard G, Bonfante P, Harrison M J, Kuster H, Lammers P, Paszkowski U, Requena N, Rensing S A, Roux C, Sanders I R, Shachar-Hill Y, Tuskan G, Young J P W, Gianinazzi-Pearson V, Martin F
Metagenomes of the Picoalga Bathycoccus from the Chile Coastal Upwelling
Vaulot D, Lepere C, Toulza E, De la Iglesia R, Poulain J, Gaboyer F, Moreau H, Vandepoele K, Ulloa O, Gavory F, Piganeau G
Molecular evidence for an Asian origin of monitor lizards followed by Tertiary dispersals to Africa and Australasia
Vidal N, Marin J, Sassi J, Battistuzzi FU, Donnellan S, Fitch AJ, Fry BG, Vonk FJ, de la Vega RCR, Couloux A, Hedges SB
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